pertpy.data.papalexi_2021¶

pertpy.data.papalexi_2021()[source]¶

ECCITE-seq dataset of 11 gRNAs generated from stimulated THP-1 cell line.

References

Papalexi, E., Mimitou, E.P., Butler, A.W. et al. Characterizing the molecular regulation of inhibitory immune checkpoints with multimodal single-cell screens. Nat Genet 53, 322–331 (2021). https://doi.org/10.1038/s41588-021-00778-2

Return type:: MuData
Returns:: MuData object of the ECCITE-seq dataset