pertpy.tools.EdgeR
==================

.. currentmodule:: pertpy.tools

.. add toctree option to make autodoc generate the pages

.. autoclass:: EdgeR



Attributes table
~~~~~~~~~~~~~~~~

.. autosummary::

    ~EdgeR.data
    ~EdgeR.variables





Methods table
~~~~~~~~~~~~~

.. autosummary::

    ~EdgeR.compare_groups
    ~EdgeR.cond
    ~EdgeR.contrast
    ~EdgeR.fit
    ~EdgeR.plot_fold_change
    ~EdgeR.plot_multicomparison_fc
    ~EdgeR.plot_paired
    ~EdgeR.plot_volcano
    ~EdgeR.test_contrasts
    ~EdgeR.test_reduced





Attributes
~~~~~~~~~~



.. autoattribute:: EdgeR.data

.. autoattribute:: EdgeR.variables






Methods
~~~~~~~



.. automethod:: EdgeR.compare_groups

.. automethod:: EdgeR.cond

.. automethod:: EdgeR.contrast

.. automethod:: EdgeR.fit

.. automethod:: EdgeR.plot_fold_change

.. automethod:: EdgeR.plot_multicomparison_fc

.. automethod:: EdgeR.plot_paired

.. automethod:: EdgeR.plot_volcano

.. automethod:: EdgeR.test_contrasts

.. automethod:: EdgeR.test_reduced